Accession	Disease	Description	Year	Source	RNA-Seq	Count	Biomarkers
GSE65391	SLE	Longitudinal transcriptional pediatric SLE study with clinical parameters	2015	Blood	N	996
GSE45291	Rheumatoid Arthritis	Inhibition of Lymphotoxin-LIGHT Signaling Reduces the Interferon Signature in Rheumatoid Arthritis Patients	2013	Blood	N	805
GSE74143	Rheumatoid Arthritis	Whole blood gene expression from subjects with moderate to severe rheumatoid arthritis	2015	Blood	N	377
GSE57386	Arthritis	Gene expression of biopsies, CD14+ and CD14- cells from RA, PsA and PsO patients with Infliximab treatment	2014	Tissue	N	255
GSE78068	Rheumatoid Arthritis	Identification of baseline gene expression signatures predicting therapeutic responses to three biologic agents in rheumatoid arthritis: a retrospective observational study	2016	Blood	N	209
GSE66795	Sjogren syndrome	A transcriptional signature of fatigue derived from patients with primary Sjögren's Syndrome	2015	Blood	N	160
GSE120178	Rheumatoid Arthritis	Pharmacodynamic Biomarkers and Differential Effects of TNF- and GM-CSF-Targeting Biologics in Rheumatoid Arthritis	2019	Blood	Y	147
GSE54629	Rheumatoid Arthritis	Whole-blood transcriptomic profiling highlights rituximab response in rheumatoid arthritis	2015	Blood	N	138
GSE117769	Rheumatoid Arthritis	Psoriatic arthritis 10 ; Healthy 50 ; Rheumatoid arthritis 51 ; Ankylosing spondylitis 8 ; Rheumatoid or Psoriatic arthritis 1	2018	Blood	Y	120
GSE10325	SLE	Expression data from human peripheral blood subsets	2008	Blood	N	67
GSE66533	Rhabdomyosarcoma	Expression Profiling of human Fusion-Positive and Fusion-Negative Rhabdomyosarcoma	2015	Tissue	N	58
GSE99967	SLE	Identification of a neutrophil-related gene expression signature that distinguishes between adult patients with and without nephritis in active systemic lupus erythematosus	2017	Blood	N	54
GSE45867	Rheumatoid Arthritis	Effects of tocilizumab versus methotrexate therapy on gene expression profiles in the early rheumatoid arthrtis synovium	2013	Tissue	N	40
GSE11886	Ankulosing Spondilitis	Gene expression analysis of macrophages from ankylosing spondylitis patients reveals interferon-gamma dysregulation	2008	Blood	N	33
GSE25160	Rheumatoid Arthritis	Combination of peripheral blood gene expression profiles and clinical parameters predicts response for tocilizumab (anti-IL6) treatment in rheumatoid arthritis	2010	Blood	N	26
GSE58173	Myositis	Upregulation of immunoproteasome subunits in myositis indicates active inflammation with involvement of antigen presenting cells, CD8 T-cells and IFNγ	2014	Tissue	N	18